GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory

Noel Kelly; P. V. Jithesh; Paul Donachy; Terence J. Harmer; Ron H. Perrott; Mark McCurley; Michael Townsley; Jim Johnston; Shane McKee

doi:10.1109/SCC.2005.55

GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory

Noel Kelly^*, P. V. Jithesh, Paul Donachy, Terence J. Harmer, Ron H. Perrott, Mark McCurley, Michael Townsley, Jim Johnston, Shane McKee

^*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

4 Citations (Scopus)

Abstract

GeneGrid is a collaborative industrial grid computing R&D project initiated by the Belfast e-Science Centre (BeSC) under the UK e-Science programme and supported by the UK Department of Trade & Industry (DTI). GeneGrid includes commercial partners who provide real business engagement. The project aims to provide a platform for scientists to access their collective resources, skills, experiences and results in a secure, reliable and scalable manner through the creation of a "Virtual Bioinformatics Laboratory". GeneGrid provides seamless integration of a myriad of heterogeneous applications and datasets that span multiple administrative domains and locations across the globe, and presents these to the scientist through a simple user friendly interface. This paper will present each of the five main GeneGrid components, and discuss how these components are integrated to form an advanced Service Oriented Architecture for automatic and dynamic in silico experiment execution. A commercial use case as provided by our industrial partners will also be discussed.

Original language	English
Title of host publication	Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005
Pages	43-50
Number of pages	8
DOIs	https://doi.org/10.1109/SCC.2005.55
Publication status	Published - 2005
Externally published	Yes
Event	2005 IEEE International Conference on Services Computing, SCC 2005 - Orlando, FL, United States Duration: 11 Jul 2005 → 15 Jul 2005

Publication series

Name	Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005
Volume	I

Conference

Conference	2005 IEEE International Conference on Services Computing, SCC 2005
Country/Territory	United States
City	Orlando, FL
Period	11/07/05 → 15/07/05

Access to Document

10.1109/SCC.2005.55

Cite this

Kelly, N., Jithesh, P. V., Donachy, P., Harmer, T. J., Perrott, R. H., McCurley, M., Townsley, M., Johnston, J., & McKee, S. (2005). GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory. In Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005 (pp. 43-50). Article 1531237 (Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005; Vol. I). https://doi.org/10.1109/SCC.2005.55

@inproceedings{1fbaefe171f34d289c1db8423177839f,

title = "GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory",

abstract = "GeneGrid is a collaborative industrial grid computing R\&D project initiated by the Belfast e-Science Centre (BeSC) under the UK e-Science programme and supported by the UK Department of Trade \& Industry (DTI). GeneGrid includes commercial partners who provide real business engagement. The project aims to provide a platform for scientists to access their collective resources, skills, experiences and results in a secure, reliable and scalable manner through the creation of a {"}Virtual Bioinformatics Laboratory{"}. GeneGrid provides seamless integration of a myriad of heterogeneous applications and datasets that span multiple administrative domains and locations across the globe, and presents these to the scientist through a simple user friendly interface. This paper will present each of the five main GeneGrid components, and discuss how these components are integrated to form an advanced Service Oriented Architecture for automatic and dynamic in silico experiment execution. A commercial use case as provided by our industrial partners will also be discussed.",

author = "Noel Kelly and Jithesh, \{P. V.\} and Paul Donachy and Harmer, \{Terence J.\} and Perrott, \{Ron H.\} and Mark McCurley and Michael Townsley and Jim Johnston and Shane McKee",

year = "2005",

doi = "10.1109/SCC.2005.55",

language = "English",

isbn = "0769524087",

series = "Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005",

pages = "43--50",

booktitle = "Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005",

note = "2005 IEEE International Conference on Services Computing, SCC 2005 ; Conference date: 11-07-2005 Through 15-07-2005",

}

Kelly, N, Jithesh, PV, Donachy, P, Harmer, TJ, Perrott, RH, McCurley, M, Townsley, M, Johnston, J & McKee, S 2005, GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory. in Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005., 1531237, Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005, vol. I, pp. 43-50, 2005 IEEE International Conference on Services Computing, SCC 2005, Orlando, FL, United States, 11/07/05. https://doi.org/10.1109/SCC.2005.55

GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory. / Kelly, Noel; Jithesh, P. V.; Donachy, Paul et al.
Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005. 2005. p. 43-50 1531237 (Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005; Vol. I).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution › peer-review

TY - GEN

T1 - GeneGrid

T2 - 2005 IEEE International Conference on Services Computing, SCC 2005

AU - Kelly, Noel

AU - Jithesh, P. V.

AU - Donachy, Paul

AU - Harmer, Terence J.

AU - Perrott, Ron H.

AU - McCurley, Mark

AU - Townsley, Michael

AU - Johnston, Jim

AU - McKee, Shane

PY - 2005

Y1 - 2005

N2 - GeneGrid is a collaborative industrial grid computing R&D project initiated by the Belfast e-Science Centre (BeSC) under the UK e-Science programme and supported by the UK Department of Trade & Industry (DTI). GeneGrid includes commercial partners who provide real business engagement. The project aims to provide a platform for scientists to access their collective resources, skills, experiences and results in a secure, reliable and scalable manner through the creation of a "Virtual Bioinformatics Laboratory". GeneGrid provides seamless integration of a myriad of heterogeneous applications and datasets that span multiple administrative domains and locations across the globe, and presents these to the scientist through a simple user friendly interface. This paper will present each of the five main GeneGrid components, and discuss how these components are integrated to form an advanced Service Oriented Architecture for automatic and dynamic in silico experiment execution. A commercial use case as provided by our industrial partners will also be discussed.

AB - GeneGrid is a collaborative industrial grid computing R&D project initiated by the Belfast e-Science Centre (BeSC) under the UK e-Science programme and supported by the UK Department of Trade & Industry (DTI). GeneGrid includes commercial partners who provide real business engagement. The project aims to provide a platform for scientists to access their collective resources, skills, experiences and results in a secure, reliable and scalable manner through the creation of a "Virtual Bioinformatics Laboratory". GeneGrid provides seamless integration of a myriad of heterogeneous applications and datasets that span multiple administrative domains and locations across the globe, and presents these to the scientist through a simple user friendly interface. This paper will present each of the five main GeneGrid components, and discuss how these components are integrated to form an advanced Service Oriented Architecture for automatic and dynamic in silico experiment execution. A commercial use case as provided by our industrial partners will also be discussed.

UR - http://www.scopus.com/inward/record.url?scp=33749070385&partnerID=8YFLogxK

U2 - 10.1109/SCC.2005.55

DO - 10.1109/SCC.2005.55

M3 - Conference contribution

AN - SCOPUS:33749070385

SN - 0769524087

SN - 9780769524085

T3 - Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005

SP - 43

EP - 50

BT - Proceedings - 2005 IEEE International Conference onServices Computing, SCC 2005

Y2 - 11 July 2005 through 15 July 2005

ER -

GeneGrid: A commercial grid service oriented Virtual Bioinformatics Laboratory

Abstract

Publication series

Conference

Access to Document

Other files and links

Fingerprint

Cite this